HCC
Toggle navigation
tSNE (By Cluster)
tSNE (By Tissue)
tSNE (By Donor)
tSNE Definition
tSNE (Genes)
Violin plot (Genes)
Control Panel
Violin Plot Group
patient
tissue
majorCelltype
Violin Plot Fill Option
mean
median
Patient Proportion
Patient Table
Sum of Patient Table
Survival
Control Panel
Low/High quantile
Survival
OS
DFS
in-silico FACS
Control Panel
plot points
x cutoff
y cutoff
Interaction
Control Panel
Highlighted Annotated Cell Type (Receptor)
B
B-Plasma
CD4-c1-CCR7
CD4-c2-ANXA1
CD4-c3-IL7R
CD4-c4-TCF7
CD4-c5-CXCL13
CD4-c6-FOXP3
CD8-c1-MKI67
CD8-c2-IL7R
CD8-c3-CX3CR1
CD8-c4-SELL
CD8-c5-GZMK
CD8-c6-KLRD1
CD8-c7-PDCD1
CD8-c8-SLC4A10
DC-c1-CD1C
DC-c2-FCER1A
DC-c3-CLEC9A
DC-c4-LAMP3
ILCs
Mast-c1-IL7R
Mast-c2-CPA3
Mono-c1-CD14
Mono-c2-FCGR3A
Mφ-c1-THBS1
Mφ-c2-C1QA
Mφ-c3-APOE
Mφ-c4-GPX3
Mφ-c5-VCAN
Mφ-c6-MARCO
NK-c1-FCGR3A
NK-c2-SELL
NK-c3-IFNG
NK-c4-IFNG-HSPA1A
NK-c5-CD69
NK-c6-IL7R
NK-c7-CD160
NK-c8-CD160-HSPA1A
NK-c9-MKI67
Highlighted Annotated Cell Type (Ligand)
B
B-Plasma
CD4-c1-CCR7
CD4-c2-ANXA1
CD4-c3-IL7R
CD4-c4-TCF7
CD4-c5-CXCL13
CD4-c6-FOXP3
CD8-c1-MKI67
CD8-c2-IL7R
CD8-c3-CX3CR1
CD8-c4-SELL
CD8-c5-GZMK
CD8-c6-KLRD1
CD8-c7-PDCD1
CD8-c8-SLC4A10
DC-c1-CD1C
DC-c2-FCER1A
DC-c3-CLEC9A
DC-c4-LAMP3
ILCs
Mast-c1-IL7R
Mast-c2-CPA3
Mono-c1-CD14
Mono-c2-FCGR3A
Mφ-c1-THBS1
Mφ-c2-C1QA
Mφ-c3-APOE
Mφ-c4-GPX3
Mφ-c5-VCAN
Mφ-c6-MARCO
NK-c1-FCGR3A
NK-c2-SELL
NK-c3-IFNG
NK-c4-IFNG-HSPA1A
NK-c5-CD69
NK-c6-IL7R
NK-c7-CD160
NK-c8-CD160-HSPA1A
NK-c9-MKI67
Interaction genepair
CADM1-CRTAM
CCL14-CCR1
CCL15-CCR1
CCL15-CCR3
CCL16-CCR1
CCL18-CCR8
CCL18-GPER1
CCL19-CCR7
CCL20-CCR6
CCL22-CCR4
CCL24-CCR3
CCL3-CCR1
CCL3-CCR5
CCL4-CCR5
CCL5-CCR3
CCL5-CCR5
CD160-TNFRSF14
CD2-CD48
CD244-CD48
CD274-CD80
CD274-PDCD1
CD40LG-CD40
CD70-CD27
CD80-CD28
CD80-CTLA4
CD84-CD84
CD86-CD28
CD86-CTLA4
CSF1-CSF1R
CSF2-CSF2RB
CXCL1-CXCR1
CXCL1-CXCR2
CXCL10-CXCR3
CXCL11-CXCR3
CXCL12-CXCR4
CXCL13-CXCR5
CXCL2-CXCR2
CXCL3-CXCR2
CXCL5-CXCR2
CXCL8-CXCR1
CXCL8-CXCR2
CXCL9-CXCR3
FASLG-FAS
FLT3LG-FLT3
IFNG-IFNGR1
IL15-IL15RA
IL15-IL2RB
IL15-IL2RG
IL16-CD4
IL18-IL18R1
IL18-IL18RAP
IL1B-IL1R1
IL1B-IL1R2
IL1RN-IL1R1
IL2-IL2RA
IL2-IL2RB
IL7-IL2RG
IL7-IL7R
LGALS9-HAVCR2
LIF-IL6ST
LIF-LIFR
LTB-LTBR
LY9-LY9
NECTIN2-CD226
NECTIN2-TIGIT
OSM-IL6ST
OSM-OSMR
PDCD1LG2-PDCD1
PF4-CXCR3
PPBP-CXCR2
PVR-CD96
PVR-TIGIT
SLAMF1-SLAMF1
SLAMF6-SLAMF6
SLAMF7-SLAMF7
TNF-TNFRSF1A
TNF-TNFRSF1B
TNFRSF14-BTLA
TNFSF10-TNFRSF10A
TNFSF10-TNFRSF10B
TNFSF10-TNFRSF10C
TNFSF10-TNFRSF10D
TNFSF11-TNFRSF10C
TNFSF11-TNFRSF11A
TNFSF12-TNFRSF10D
TNFSF12-TNFRSF25
TNFSF13-TNFRSF13B
TNFSF13-TNFRSF17
TNFSF13B-TNFRSF13B
TNFSF13B-TNFRSF13C
TNFSF13B-TNFRSF17
TNFSF14-LTBR
TNFSF4-TNFRSF4
TNFSF8-TNFRSF8
TNFSF9-TNFRSF9
XCL1-XCR1
XCL2-XCR1
tSNE (Gene Module)
Module Violin Plot(Gene Module)
Module Gene Heatmap
Gene Signiture Input
Gene Signatures
Treg
CD8.T.Cell.Activation
Anti.inflammatory
Anergy
Pro.inflammatory
Lipid.mediators
Glycolysis
TCA.cycle
Pentose.Phosphate.Pathway
Glycogen.Metabolism
Glucose.Deprivation
M1.Macrophage.Polarization
M2.Macrophage.Polarization
Cytolytics.effector.pathway
Type.I.Interferon.response
Type.II.Interferon.Response
Hypoxia.HIF.regulated
TCell.Terminal.Differentiation
G1.S
G2.M
Submit
Customized Gene Signatures
Customized Gene Signatures Name
Add to GeneSignatures
Control Panel
Plot Group
patient
tissue
majorCelltype
Module Method
Mean Expression
Median Expression
Violin Plot Fill Option
mean
median